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Chlamydia During Pregnancy: Risks, Symptoms, and What It Means for Your Baby

Chlamydia During Pregnancy: Risks, Symptoms, and What It Means for Your Baby

18 April 2026
23 min read
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Most people who have chlamydia during pregnancy have no idea. No symptoms, no warning signs, nothing that would send them to a doctor between prenatal appointments. That's what makes it complicated, and it's exactly why understanding the real risks, the testing windows, and what treatment looks like during pregnancy matters more than most people realize. This article covers all of it: what chlamydia actually does during pregnancy, what it means for your baby if it goes untreated, and what you can do about it today.

Last updated: April 2026

Chlamydia is one of the most treatable infections that exists, and catching it during pregnancy, even late, makes a real difference to your baby's outcomes. What follows is everything you need to know: what untreated chlamydia actually does during pregnancy, why most women have no symptoms at all, and exactly when and how to test.

Chlamydia during pregnancy deserves more attention than it typically gets. According to provisional data from the CDC's 2024 STI Surveillance Report, chlamydia remains the most commonly reported bacterial sexually transmitted infection in the United States, over 1.5 million cases reported in a single year, with the actual number almost certainly higher because most cases go undetected. Young women, including those in their prime reproductive years, account for the highest proportion of reported cases. That statistical backdrop matters during pregnancy because it means chlamydia is not a remote possibility to check off a list; it is the most likely bacterial STI to be present in a pregnant person without their knowledge.

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What Chlamydia Does During Pregnancy, and Why It's Different from the General Population


Chlamydia during pregnancy is caused by the bacterium Chlamydia trachomatis and can lead to preterm birth, premature rupture of membranes, and low birth weight if left untreated. At delivery, an active infection can pass to the baby through the birth canal, causing neonatal eye infection (conjunctivitis) in 18–44% of exposed newborns and pneumonia in 3–16%. Most pregnant women have no symptoms. A test from 14 days after exposure is the only way to know.

Chlamydia is caused by the bacterium Chlamydia trachomatis, which infects the genital tract, cervix, urethra, rectum, and throat. It spreads through vaginal, anal, and oral sex. In the general population, chlamydia is highly treatable and, when caught early, leaves no lasting effects. During pregnancy, the stakes shift, not because the infection behaves differently inside your body, but because your body is now supporting a developing fetus whose immune system isn't equipped to fight off bacterial infections on its own.

Pregnancy doesn't make you more likely to contract chlamydia, but it does change what the infection means if it's there. The bacteria establish themselves primarily in the cervix, where they can trigger a low-grade inflammatory response in the cervicovaginal tissue. That inflammation is what researchers believe drives most of the adverse pregnancy outcomes associated with untreated chlamydia, not direct fetal infection, but the body's immune response to an infection that shouldn't be there.

The hormonal and immune environment of pregnancy also affects how the infection presents. The cervix is more vascularized during pregnancy, and normal pregnancy discharge can easily mask chlamydia-related discharge. The result is that an infection which might produce noticeable symptoms in a non-pregnant person can sit silently through months of prenatal care, undetected on the standard prenatal panel, right up until delivery.

One critical point that doesn't get enough airtime: chlamydia is not automatically included in the standard prenatal STI panel in the United States. The CDC recommends that all pregnant women younger than 25, and older pregnant women at increased risk, be screened at the first prenatal visit and again in the third trimester. But if you're over 25 and your provider doesn't flag you as high-risk, you may not be offered the test at all. According to a 2024 systematic review presented at the Society of Obstetricians and Gynaecologists of Canada's Annual Clinical and Scientific Conference, targeted screening approaches consistently miss cases, which means the burden of awareness often falls on the patient, not the provider.

Chlamydia Symptoms During Pregnancy, and Why Most Women Won't Have Any


Here's the number that matters most for understanding chlamydia in pregnancy: roughly 70 to 80 percent of people with chlamydia have no symptoms at all. That figure holds during pregnancy. For most pregnant women, chlamydia produces no discharge, no pain, no burning, nothing that would register as a sign that something is wrong. The infection can persist through the entire pregnancy, silently, and only become a problem at the moment of delivery when the baby passes through an infected birth canal.

When symptoms do appear, they can look a lot like normal pregnancy changes, which is part of what makes them easy to miss. Increased vaginal discharge is a hallmark of healthy pregnancy. Mild discomfort during urination can happen with a UTI, which is also more common during pregnancy. Pelvic pressure and lower abdominal discomfort show up for entirely benign reasons throughout the second and third trimesters. Chlamydia symptoms, when they exist, include a watery or yellowish vaginal discharge with possible odor, a burning sensation when urinating, pain during sex, and occasionally mild lower abdominal pain or pelvic pressure. None of these are specific to chlamydia, which is precisely why a lab test is always necessary for a confirmed diagnosis.

Table 1. Chlamydia Symptoms vs. Normal Pregnancy Changes
Feature Normal Pregnancy Possible Chlamydia
Vaginal discharge Clear to white, odorless, increased volume Watery, yellowish, possible mild odor
Urination Increased frequency, occasional mild discomfort Burning or pain when urinating
Pelvic discomfort Pressure, heaviness, round ligament pain Mild aching or pelvic pain not explained by round ligament
Pain during sex Common due to increased blood flow and sensitivity Cervical tenderness that persists outside of sex
Odor Absent or very mild Mild, unusual odor may be present
How to confirm Observation; prenatal exam Requires lab test, symptoms alone are never enough

The takeaway from that table is not that you should be cataloguing every symptom. It's that symptoms are an unreliable guide for chlamydia in pregnancy, full stop. The most dangerous version of this infection is the one you feel nothing from. If you have any reason to think you may have been exposed, a new partner during pregnancy, a partner who hasn't been recently tested, or simply the fact that you haven't been screened since your first prenatal visit, a test is the only thing that gives you a definitive answer.

For a broader look at how chlamydia testing windows compare to other common STIs, the guide to STD testing windows by infection covers exact timing for every major infection in one place.

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The Real Risks: What Untreated Chlamydia Does to Your Pregnancy and Your Baby


The risks of untreated chlamydia during pregnancy are well-documented enough to take seriously, and specific enough that understanding them is more useful than worrying about them in the abstract. They fall into two categories: what happens to the pregnancy itself, and what happens to the baby at delivery and after.

For the pregnancy, untreated chlamydia has been linked to premature rupture of membranes, the amniotic sac breaking before labor begins, preterm birth before 37 weeks of gestation, and low birth weight. According to a review published in Frontiers in Public Health, some studies have found untreated chlamydia in pregnancy may carry up to a two- to four-fold increased risk for preterm labor and delivery. The proposed mechanism involves the inflammatory response triggered by the bacteria in cervicovaginal tissue, the body's immune response produces cytokines and prostaglandins that can prematurely ripen the cervix and weaken the amniotic membranes, setting off a cascade that resembles early labor before the pregnancy has reached term.

For the baby, the primary risk occurs during delivery. When a baby passes through an infected birth canal, they can be exposed to Chlamydia trachomatis in the vaginal secretions, which can then colonize their eyes or respiratory tract. Two specific conditions result from this exposure. Chlamydial conjunctivitis, an eye infection, is the most common presentation, typically appearing within the first one to two weeks after birth. According to the American Pregnancy Association, chlamydial conjunctivitis occurs in 18 to 44 percent of babies born to mothers with untreated chlamydia at delivery. Chlamydial pneumonia, a more serious lung infection, develops in 3 to 16 percent of exposed newborns, typically presenting between three weeks and three months after birth with a characteristic cough and breathing difficulties that require medical treatment.

Table 2. Risks of Untreated Chlamydia During Pregnancy
Risk Who It Affects Key Facts
Premature rupture of membranes The pregnancy Amniotic sac breaks early; triggers early or complicated labor
Preterm birth (before 37 weeks) The pregnancy and baby Associated with inflammatory response to infection; linked in multiple studies
Low birth weight The baby Linked to preterm delivery and disruption of normal fetal growth environment
Chlamydial conjunctivitis The newborn Eye infection; affects 18–44% of babies born to untreated mothers at delivery
Chlamydial pneumonia The newborn Lung infection; affects 3–16% of exposed newborns; typically presents weeks after birth
Increased HIV susceptibility The mother Genital inflammation from chlamydia creates greater vulnerability to co-infections including HIV

Two things worth saying plainly about that table. First, these are statistical risks across populations, not guarantees for any individual pregnancy. Plenty of women have had chlamydia during pregnancy and delivered healthy babies. What the data shows is that untreated infection raises the risk of these outcomes; it doesn't make them inevitable. Second, every one of the risks in that table is preventable with timely detection and treatment. That's the whole point of understanding them.

The question of whether chlamydia causes miscarriage is worth addressing directly because it comes up in almost every search on this topic. The evidence is inconclusive. Some studies have found an association between chlamydia and pelvic inflammatory disease, which can in turn increase miscarriage risk. But a direct, established causal link between chlamydia alone and first-trimester miscarriage has not been confirmed in the literature. The more consistent risks, preterm birth, membrane rupture, neonatal eye and lung infection, are the ones with solid evidence behind them.

Who Is Most at Risk for Chlamydia During Pregnancy


Chlamydia doesn't discriminate by pregnancy status, it spreads through sexual contact with an infected partner, and being pregnant changes none of the biology of how that happens. But certain factors raise the baseline risk meaningfully, and understanding them helps clarify whether a test at the first prenatal visit is the end of the story or just the beginning.

Age is the single strongest predictor of chlamydia risk. Women under 25 account for a disproportionate share of all reported chlamydia infections, a pattern driven partly by biology (the cervical cells of younger women are more susceptible to infection) and partly by behavioral factors like higher rates of new or multiple partners. The CDC and the American College of Obstetricians and Gynecologists both recommend that all pregnant women under 25 be screened at their first prenatal visit and again in the third trimester, without exception.

For women over 25, the official guidance shifts to a risk-based model, which means you're more likely to be offered a test if you report a new partner during pregnancy, multiple partners, or a history of prior STIs. The gap in that approach is that it depends on a provider asking the right questions and a patient answering them honestly in a setting that often feels rushed or clinical. A 2024 study presented at Canada's PHAC-related annual conference found that targeted screening, only testing women flagged as high-risk, consistently misses cases that universal screening would have caught. The practical implication is that self-testing between prenatal appointments fills a real gap, not just a theoretical one.

Other factors that raise risk include: a partner who has not been recently tested, a previous chlamydia diagnosis, a history of any STI, or a new sexual partner at any point during the pregnancy. If any of those apply, the question isn't whether to test, it's when.

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When and How to Test for Chlamydia During Pregnancy


Testing for chlamydia during pregnancy is safe, straightforward, and one of the more useful things you can do for your birth outcomes regardless of how the result comes back. A urine sample or a vaginal swab, both of which are either done by your provider or self-collected for an at-home test, are the standard collection methods. Neither poses any risk to the pregnancy.

The timing question has a specific answer: test from 14 days after exposure. Chlamydia has a shorter detectable window than most other STIs, which means you don't have to wait weeks before getting a meaningful result. If you were tested at the first prenatal visit and have since had any potential new exposure, 14 days after that exposure is when an accurate result becomes available. If you were tested in the first trimester and are now in the third trimester, current CDC guidance recommends rescreening for women who are under 25 or at elevated risk, even without symptoms and even if the first test was negative.

Table 3. STI Testing Windows During Pregnancy, When to Test After Exposure
Infection Test From Why It Matters in Pregnancy
Chlamydia 14 days after exposure Can pass to baby at delivery; causes neonatal conjunctivitis and pneumonia
Gonorrhea 3 weeks after exposure Often co-occurs with chlamydia; linked to preterm birth and neonatal eye infection
Syphilis 6 weeks after exposure Congenital syphilis is a leading cause of stillbirth and neonatal death; routinely screened prenatally
HIV 6 weeks (first indicator); retest at 12 weeks for certainty Vertical transmission to baby is preventable with early detection and treatment
Hepatitis B 6 weeks after exposure Can pass to baby at delivery; neonatal vaccination at birth reduces risk
Hepatitis C 8–11 weeks after exposure Vertical transmission risk; no neonatal vaccine available

The standard clinical test for chlamydia is a nucleic acid amplification test (NAAT), which detects the genetic material of the bacteria and is highly accurate. At-home rapid test kits use lateral flow technology on a urine sample or vaginal swab and deliver results in minutes. The Chlamydia At-Home STD Test Kit from STD Test Kits is a practical option for testing between prenatal appointments or when a clinic visit isn't immediately accessible. For a broader picture during pregnancy, particularly if you want to rule out other common infections alongside chlamydia, the 7-in-1 Complete At-Home STD Test Kit screens for chlamydia, gonorrhea, syphilis, HIV, herpes HSV-2, hepatitis B, and hepatitis C in a single collection.

If you've ever been unsure about when to test after a specific exposure, for chlamydia or any other STI, the complete guide to STD testing window periods after exposure lays out exact timings for every major infection.

One important thing to understand about a negative result: a negative test at 14 days is highly reassuring, but if you have specific ongoing concerns, a partner who tested positive, for example, retesting at six to eight weeks provides an additional layer of certainty. A single negative result after a known exposure, especially if taken slightly early, is not necessarily the final word.

For a detailed look at what at-home STD testing during pregnancy looks like in practice, the article on using at-home rapid STD tests safely while pregnant covers the collection process, limitations, and next steps after a result, the same principles apply to chlamydia testing.

What Happens If You Test Positive for Chlamydia During Pregnancy


A positive chlamydia result during pregnancy is not an emergency; it's information, and it's information that arrives at exactly the right time to act on. Chlamydia is one of the most treatable bacterial infections that exists, and the antibiotics used to treat it during pregnancy are safe for the developing baby.

Treatment for chlamydia in pregnancy involves a course of antibiotics prescribed by your provider. Azithromycin, a single-dose oral antibiotic, is the most commonly used option because of its safety profile during pregnancy and its simplicity as a one-time dose. Amoxicillin is an alternative sometimes used across all three trimesters. Doxycycline, which is the standard treatment for chlamydia in non-pregnant adults, is not recommended during pregnancy. Your provider will prescribe whichever option is appropriate for your stage of pregnancy and health profile. This article does not name specific dosages, and those decisions belong with your care team, but the key point is that effective, pregnancy-safe options exist.

After treatment, a test of cure, retesting to confirm the infection has cleared, is typically recommended approximately three to four weeks after completing the antibiotic course. This step matters more during pregnancy than at other times, because the stakes of an uncleared infection at delivery are higher. Your provider will advise on the exact timing.

Your partner needs to be tested and treated at the same time. This is not optional. If your partner carries the infection and is untreated, reinfection during pregnancy is not just possible, it's likely, and a second round of chlamydia during pregnancy carries the same risks as the first. Most states permit expedited partner therapy (EPT), which allows a provider to prescribe treatment for a sexual partner without requiring them to have their own clinic visit. Ask your provider whether that's available to you.

Avoid sexual contact until both you and your partner have completed treatment and any symptoms have resolved. After that, a test to confirm clearance and a discussion with your provider about rescreening timing in the third trimester rounds out the management plan.

People are also reading: STD Risk Checker Quiz: Do You Need to Get Tested?


Can Chlamydia Be Passed to the Baby During Delivery, and What Happens If It Is


Yes, and this is the most important reason to detect and treat chlamydia before delivery rather than discovering it afterward. When a baby passes through a birth canal where Chlamydia trachomatis is present, they can be directly exposed to the bacteria in vaginal secretions. The bacteria can colonize the baby's conjunctiva (the lining of the eye) or their respiratory tract during the birth process.

Chlamydial conjunctivitis in newborns is the most common outcome of this exposure. It typically presents within the first one to two weeks after birth as redness, swelling, and discharge from the eyes, often significant enough that the eyelids crust shut. Left untreated, it can cause scarring of the cornea and, in severe cases, vision damage. It responds well to antibiotic treatment once identified, but the fact that it appears after discharge from the hospital means it can be missed if parents and pediatricians aren't watching for it.

Chlamydial pneumonia is a less common but more serious outcome. It typically presents between three weeks and three months after birth with a distinctive staccato cough, difficulty breathing, and in some cases fever. Newborn lungs are not equipped to handle the kind of inflammatory infection that C. trachomatis can cause, and it requires prompt antibiotic treatment. Unlike conjunctivitis, which usually makes itself obvious fairly quickly, chlamydial pneumonia can be initially mistaken for a respiratory virus in the first weeks of a newborn's life.

The good news, and this is genuinely good news, is that successful treatment of chlamydia before delivery eliminates the transmission risk almost entirely. If the infection is cleared before the baby passes through the birth canal, there is nothing to expose the baby to. This is why prenatal detection and treatment, rather than neonatal treatment after the fact, is the preferred approach. A positive test at 32 weeks is far better than an undetected infection at 40.

The Screening Gap: Why Chlamydia During Pregnancy Gets Missed


You might assume that routine prenatal care catches everything, that if something were wrong, a blood test or swab at your first appointment would have flagged it. That assumption is unfortunately not accurate for chlamydia, and understanding why helps make sense of why at-home testing has a genuine role in prenatal care, not just as a convenience but as a real gap-filler.

The standard prenatal STI panel in the US typically includes HIV, syphilis, hepatitis B, and, for women under 25 or deemed high-risk, chlamydia and gonorrhea. If you're over 25 and your provider doesn't classify you as elevated risk based on the questions asked at your intake appointment, you may not be screened for chlamydia at all, regardless of your actual risk. Current CDC guidance recommends universal chlamydia screening for pregnant women under 25 and risk-based screening for older women, a framework that, by design, will miss a portion of cases in women over 25 who don't fit a neatly defined risk profile.

Even when screening is performed at the first prenatal visit, a negative result at eight weeks doesn't tell you anything about exposure at 20 weeks. New exposures during pregnancy are possible, and chlamydia acquired after the first prenatal screening will not be detected unless a second test is done. The CDC's recommendation to rescreen high-risk women in the third trimester exists precisely because of this gap, but it applies to a narrower group than the full pregnant population.

Lying awake at midnight Googling chlamydia symptoms because something changed and you don't want to wait two weeks for a prenatal appointment is exactly the kind of situation that at-home testing was designed for. A test that takes minutes to use and gives you a clear result is almost always better than weeks of uncertainty. If the result is negative, you can sleep. If it's positive, you can call your provider in the morning with information instead of just anxiety.

If you want a structured way to evaluate your personal STI exposure risk during pregnancy, the STD risk checker quiz for pregnancy and beyond is a useful starting point. And for a clear explanation of why testing too early after exposure can produce a false negative, the article on why STD tests come back negative after a real exposure covers the window period biology in plain terms.

A comprehensive at-home rapid test that screens for 8 infections, HSV‑1 & HSV‑2, HIV, Hepatitis B & C, Chlamydia, Gonorrhea, and Syphilis, in just 15 minutes. Fast, private, and clinic-free. CE, ISO 13485 and GMP certified,...

FAQs


1. Can chlamydia cause a miscarriage?

The evidence is inconclusive. A direct causal link between chlamydia alone and first-trimester miscarriage hasn't been firmly established. The better-documented risks, preterm birth, premature rupture of membranes, and neonatal infection at delivery, have more consistent evidence behind them. If you're pregnant and worried, testing and treating early is the most useful thing you can do.

2. Is it safe to treat chlamydia during pregnancy?

Yes, the antibiotics used have well-established safety profiles in pregnancy. Azithromycin and amoxicillin are both considered safe options. Doxycycline, the standard adult treatment, is not recommended during pregnancy. Your provider will choose what's appropriate for your situation. The risk of leaving the infection untreated is far greater than the risk of treatment.

3. Can my baby get chlamydia even if I don't have symptoms?

Yes. The absence of symptoms has no bearing on whether the infection can be transmitted at delivery. An asymptomatic infection is just as transmissible through the birth canal as a symptomatic one, which is precisely why testing during pregnancy matters even when everything feels fine.

4. How long after exposure can I test for chlamydia during pregnancy?

Test from 14 days after exposure, chlamydia has one of the shorter detection windows of any common STI. If your result at 14 days is negative but you had a confirmed exposure to a positive partner, retesting at six to eight weeks provides an additional layer of certainty.

5. Will chlamydia show up in my routine prenatal blood test?

No, chlamydia requires a separate urine or vaginal swab test that is not part of the standard prenatal blood panel. Routine prenatal bloods check for anemia, blood type, rubella immunity, hepatitis B, syphilis, and HIV. If you haven't been specifically told you were tested for chlamydia, you likely weren't.

6. Can I pass chlamydia to my baby through breastfeeding?

No, chlamydia is not transmitted through breast milk. It spreads through direct mucosal contact, not through feeding. If you've been treated and cleared the infection, breastfeeding carries no chlamydia transmission risk whatsoever.

7. What happens if chlamydia is treated but my partner isn't?

You'll almost certainly get reinfected, and reinfection during pregnancy carries the same risks as the original infection. Both partners must be tested and treated simultaneously, with no sexual contact until both have finished treatment. Ask your provider about expedited partner therapy (EPT), which lets a partner receive treatment without their own clinic visit.

8. Does chlamydia during pregnancy affect fertility after delivery?

Not if it's treated before it progresses to pelvic inflammatory disease (PID). Untreated chlamydia that ascends to the fallopian tubes can cause scarring that increases the risk of ectopic pregnancy or difficulty conceiving later. Treating during pregnancy, even late, prevents that progression.

9. Can I use an at-home chlamydia test while pregnant?

Yes, at-home chlamydia tests use a urine sample or vaginal swab, neither of which poses any risk during pregnancy. If the result is positive, contact your provider immediately to confirm and begin treatment. At-home testing is particularly practical between prenatal appointments when you want an answer before your next scheduled visit.

10. Is chlamydia more common during pregnancy?

No, pregnancy doesn't increase your biological susceptibility to chlamydia. What changes is the stakes: the consequences of an untreated infection are higher, symptoms are harder to distinguish from normal pregnancy changes, and standard prenatal screening has real gaps that leave many cases undetected.

Testing During Pregnancy: Clarity Matters More Than Guessing


Chlamydia during pregnancy is common, frequently silent, and entirely treatable, but only when it's detected. The risks to your baby are real and specific: neonatal conjunctivitis in up to 44 percent of exposed newborns, chlamydial pneumonia in up to 16 percent, and a well-documented association between untreated infection and preterm birth. None of those risks are inevitable, and none of them require anything extraordinary to prevent. They require a test, a result, and treatment if the result is positive. That's the whole equation.

Standard prenatal care has known gaps when it comes to chlamydia screening, particularly for women over 25 and for infections acquired after the first prenatal visit. The Chlamydia At-Home STD Test Kit delivers results in minutes from a urine sample collected at home, with no clinic visit, no waiting room, and no appointment needed. If you want broader coverage alongside chlamydia, gonorrhea, syphilis, HIV, herpes, hepatitis B and C, the 7-in-1 Complete At-Home STD Test Kit screens for all of them in one collection. For women wanting the most comprehensive picture, the Women's 10-in-1 At-Home STD Test Kit adds trichomoniasis and HPV to the panel. Visit STD Test Kits to see all available options. During pregnancy, the fastest way to stop guessing is to know.

How We Sourced This: Our article was constructed based on current advice from the most prominent public health and medical organizations, and then molded into simple language based on the situations that people actually experience, such as treatment, reinfection by a partner, no-symptom exposure, and the uncomfortable question of whether it "came back." In the background, our pool of research included more diverse public health advice, clinical advice, and medical references, but the following are the most pertinent and useful for readers who want to verify our claims for themselves.

Sources


1. CDC Sexually Transmitted Infections Surveillance, 2024 (Provisional)

2. Chlamydia trachomatis Screening and Treatment in Pregnancy to Reduce Adverse Pregnancy and Neonatal Outcomes: A Review, Frontiers in Public Health / PMC

3. CDC STI Treatment Guidelines: Chlamydia

4. Chlamydia During Pregnancy, American Pregnancy Association

5. Acceptability, Feasibility, Equity and Resource Use for Prenatal Screening for Chlamydia and Gonorrhea, PHAC / Canada Communicable Disease Report, 2024

6. Clinical Updates in Sexually Transmitted Infections, 2024, Journal of Women's Health / PubMed

About the Author


Dr. F. David, MD is a board-certified infectious disease specialist focused on STI prevention, diagnosis, and treatment. He writes with a direct, sex-positive, stigma-free approach designed to help readers get clear answers without the panic spiral.

Reviewed by: Rapid STD Test Kits Medical Review Team | Last medically reviewed: April 2026

This article is for informational purposes and does not replace medical advice.